Join our next AnVIL Demo!

Collecting and subsetting SRA data

December 14, 2023 at 11:00 AM ET (your time zonehttps://www.timeanddate.com/worldclock/fixedtime.html?msg=AnVIL+Demo&iso=20231214T11&p1=%3A&ah=1) on Zoom

11:00 AM - 11:30 AM ET – Demo on AnVIL In this demo, Ava Hoffman from the Fred Hutch Cancer Research Center will describe how to pull data from SRA into AnVIL and use a public workflow to subset data into smaller files for analysis testing and training.

11:30 AM - 12:00 PM ET – Q&A

We’ll open up the floor to questions about the demo presented, and will have AnVIL and Terra support on call to answer any questions about AnVIL you might have!

✏️ Sign up: https://urldefense.com/v3/__https:/forms.gle/7CcaLE9AM7FrYqpP7__;!!GuAItXPztq0!krLmhn_VBtbG0qhEfKRS8ux91hFKSfirYvcUqmVUazYt114HgA-0SrXW38kVF_nT__vBf5vKLggWZ_ovz_txihayINpCnaBQ854RA9_V6A$ https://forms.gle/7CcaLE9AM7FrYqpP7

Future Demos Sign up for the 2024 schedule! Topics are to be announced.

What are AnVIL Demos?

AnVIL Demos are a monthly, virtual meeting where we highlight what you can do on the NHGRIhttps://www.genome.gov/ Analysis, Visualization, and Informatics Lab-space (AnVILhttps://anvilproject.org/), a cloud-based computing platform for genomic data science! AnVIL Demos will start out with a 30-minute demonstration on the platform followed by open time for Q&A and user support.

The demos will highlight a range of topics, from a capability of the platform to a scientific analysis powered by AnVIL. If you’re interested in showcasing how you use AnVIL at a future AnVIL Demos session, reach out to Natalie Kucher (nkucher3@jhu.edumailto:nkucher3@jhu.edu). After the demo, we’ll open up the floor to answer questions about the demo and to answer any general questions you might have about AnVIL.

Watch our past Demos from our YouTube playlisthttps://www.youtube.com/playlist?list=PL6aYJ_0zJ4uC978C57P3TgAAfB38uy58E!

✏️ Sign up for more demos: https://urldefense.com/v3/__https:/forms.gle/7CcaLE9AM7FrYqpP7__;!!GuAItXPztq0!krLmhn_VBtbG0qhEfKRS8ux91hFKSfirYvcUqmVUazYt114HgA-0SrXW38kVF_nT__vBf5vKLggWZ_ovz_txihayINpCnaBQ854RA9_V6A$ https://forms.gle/7CcaLE9AM7FrYqpP7

Resources

* AnVIL Getting Started Guide. An opinionated guide on how to get set up and start your work on AnVIL. Get started herehttps://jhudatascience.org/AnVIL_Book_Getting_Started/. * AnVIL YouTube Channel. Learn about AnVIL capabilities and features with our “AnVIL in 2 minutes” videos. Watch AnVIL in 2 minutes herehttps://www.youtube.com/playlist?list=PL6aYJ_0zJ4uCABkMngSYjPo_3c-nUUmio or watch past AnVIL Demos herehttps://www.youtube.com/playlist?list=PL6aYJ_0zJ4uC978C57P3TgAAfB38uy58E. * AnVIL Support Forum. Join the conversation at help.anvilproject.orghttp://help.anvilproject.org/.

Upcoming Events

Sign up to hear about future AnVIL Demos and announcements at lists.anvilproject.orghttps://lists.anvilproject.org/lists/anvil-mailing-list.lists.anvilproject.org/ and learn about upcoming events at https://anvilproject.org/events!

Best, Natalie

-- Natalie Kucher | Project Manager Johns Hopkins University Department of Biology Krieger School of Arts & Sciences nkucher3@jhu.edumailto:nkucher3@jhu.edu https://anvilproject.org/